BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B08SP1|AL427268
(991 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1351 1470 0.0
>3x_Contig1351
Length = 9242
Score = 1470 bits (741), Expect = 0.0
Identities = 741/741 (100%)
Strand = Plus / Minus
Query: 1 aacatgcaagtgaacatgacttctttagacaacgaggacatttatacttccatgtctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aacatgcaagtgaacatgacttctttagacaacgaggacatttatacttccatgtctcat 682
Query: 61 tcagacacaccatacacttgtcatccatatctgtttttttttttgaaagatccaggtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcagacacaccatacacttgtcatccatatctgtttttttttttgaaagatccaggtgtg 622
Query: 121 aagttgagggtatcgtattgcaatccaacgtaatgactctgaccaatttctggtgcctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagttgagggtatcgtattgcaatccaacgtaatgactctgaccaatttctggtgcctca 562
Query: 181 tctcatctcatctcatctcatagtattggaatttttcactatgtaatgattcaaataaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctcatctcatctcatctcatagtattggaatttttcactatgtaatgattcaaataaag 502
Query: 241 aaacgaaattcagacataaactacctattaaacaaagtataatcccatgatatctgtttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaacgaaattcagacataaactacctattaaacaaagtataatcccatgatatctgtttg 442
Query: 301 cgaattctatcccgctcaacttgttaggttcaggcccgtttagtagtgatgtaagataga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgaattctatcccgctcaacttgttaggttcaggcccgtttagtagtgatgtaagataga 382
Query: 361 accctcacttagtgctgactaaaagaccacttcaggctgtctctactcgagacctcgttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accctcacttagtgctgactaaaagaccacttcaggctgtctctactcgagacctcgttc 322
Query: 421 ttaaacatcatctcgtatgtaacgatagccctattttcatttcgatcccaatatgagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaaacatcatctcgtatgtaacgatagccctattttcatttcgatcccaatatgagaaa 262
Query: 481 cctgaaattacaaaggtttaaataaaacgctttgtaggaaactatggtcgtagattaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgaaattacaaaggtttaaataaaacgctttgtaggaaactatggtcgtagattaaaa 202
Query: 541 tgaaaccaatcaggttcatcagcagatcagctagtgcataatactcaccaaccacagcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaaaccaatcaggttcatcagcagatcagctagtgcataatactcaccaaccacagcag 142
Query: 601 cgatggtatgtgccataacattcactaattaggattttaatatggagataaagtgcagct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cgatggtatgtgccataacattcactaattaggattttaatatggagataaagtgcagct 82
Query: 661 tttactaacatgatacataaactatgaatagtctcaaaacggtattgcaacactattgaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tttactaacatgatacataaactatgaatagtctcaaaacggtattgcaacactattgaa 22
Query: 721 ggccgaaaaagaggctcacga 741
|||||||||||||||||||||
Sbjct: 21 ggccgaaaaagaggctcacga 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 13,463
Number of Sequences: 1807
Number of extensions: 13463
Number of successful extensions: 610
Number of sequences better than 1.0e-20: 1
length of query: 991
length of database: 10,358,551
effective HSP length: 16
effective length of query: 975
effective length of database: 10,329,639
effective search space: 10071398025
effective search space used: 10071398025
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)